Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bmp family abc transporter substrate-binding protein | RPAL_RS25060 | Q2YKI6 | + | 5441232 - 5442329 | 39666.5 |
| s1c family serine protease | RPAL_RS25065 | Not Available | - | 5442525 - 5443490 | 34072.8 |
| tripartite tricarboxylate transporter substrate binding protein | RPAL_RS25070 | Not Available | - | 5443610 - 5444605 | 34383.3 |
| o-antigen ligase | RPAL_RS25075 | Not Available | + | 5444863 - 5446119 | 45297.2 |
| udp-glucose 4-epimerase gale | RPAL_RS25080 | Q59083 | + | 5446150 - 5447133 | 35394.9 |
| wecb/taga/cpsf family glycosyltransferase | RPAL_RS25085 | Q6GJ34 | + | 5447361 - 5448278 | 34796.8 |
| glycoside hydrolase family 5 protein | RPAL_RS25090 | P14250 | - | 5448294 - 5449430 | 41682.8 |
| exopolysaccharide transport family protein | RPAL_RS25095 | Not Available | - | 5449446 - 5451602 | 77107.5 |
| glycosyltransferase family 4 protein | RPAL_RS25100 | Not Available | + | 5451978 - 5453105 | 40900.5 |
| hypothetical protein | RPAL_RS25105 | Not Available | + | 5453127 - 5454656 | 56033.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.