Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| enoyl-acp reductase fabi | RPAL_RS25010 | P58380 | - | 5430552 - 5431313 | 27175.9 |
| adp-polyphosphate phosphotransferase | RPAL_RS25015 | Q6N140 | - | 5431396 - 5432265 | 34058.5 |
| hypothetical protein | RPAL_RS25020 | Not Available | + | 5432647 - 5434029 | 50445.7 |
| ba14k family protein | RPAL_RS25025 | Not Available | - | 5434109 - 5434513 | 13698.1 |
| do family serine endopeptidase | RPAL_RS25030 | Not Available | - | 5434744 - 5436306 | 53868.8 |
| hypothetical protein | RPAL_RS25035 | Not Available | - | 5436567 - 5437055 | 16530.6 |
| hypothetical protein | RPAL_RS25040 | Not Available | - | 5437164 - 5437448 | 9862.47 |
| abc transporter atp-binding protein | RPAL_RS25045 | D4GPW3 | + | 5437606 - 5439171 | 55321.5 |
| abc transporter permease | RPAL_RS25050 | D4GPW2 | + | 5439155 - 5440246 | 37853.5 |
| abc transporter permease | RPAL_RS25055 | D4GPW1 | + | 5440233 - 5441150 | 30483.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.