Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RPAL_RS00555 | Not Available | - | 121366 - 122574 | 43859.0 |
| zinc-binding dehydrogenase | RPAL_RS00560 | Q9WYP3 | - | 122594 - 123634 | 35926.7 |
| thiamine pyrophosphate-binding protein | RPAL_RS00565 | P66947 | - | 123664 - 125412 | 61977.3 |
| sdr family nad(p)-dependent oxidoreductase | RPAL_RS00570 | A7IQH5 | - | 125453 - 126241 | 27311.7 |
| tetr/acrr family transcriptional regulator | RPAL_RS00575 | Not Available | + | 126292 - 127104 | 30035.9 |
| sulfite exporter taue/safe family protein | RPAL_RS00580 | Not Available | - | 127157 - 127957 | 27464.8 |
| aldehyde dehydrogenase family protein | RPAL_RS00585 | Q02DY9 | - | 127954 - 129465 | 52982.3 |
| nuclear transport factor 2 family protein | RPAL_RS00590 | Not Available | + | 129677 - 130084 | 14709.2 |
| fad-binding oxidoreductase | RPAL_RS00595 | Not Available | + | 130081 - 131475 | 51150.9 |
| hypothetical protein | RPAL_RS00600 | Not Available | - | 131599 - 131907 | 10815.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.