Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase family protein | RPAL_RS00405 | Q9A2M1 | - | 86632 - 87354 | 26104.8 |
| hypothetical protein | RPAL_RS00410 | Not Available | - | 87512 - 87820 | 11516.0 |
| bifunctional trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae/phosphotransferase | RPAL_RS00415 | Q9A2M2 | - | 87924 - 89444 | 55116.0 |
| pas domain-containing sensor histidine kinase | RPAL_RS00420 | Q9RQQ9 | - | 89441 - 91954 | 91665.0 |
| dutp diphosphatase | RPAL_RS00425 | P61911 | - | 92174 - 92632 | 16002.3 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | RPAL_RS00430 | Q9KVD1 | - | 92629 - 94074 | 50656.3 |
| 2-polyprenylphenol 6-hydroxylase | RPAL_RS00435 | A1U669 | - | 94128 - 95705 | 58234.2 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | RPAL_RS00440 | Q6NDM2 | - | 95702 - 96463 | 28395.8 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | RPAL_RS00445 | B3Q620 | + | 96707 - 97582 | 32192.6 |
| serine protease | RPAL_RS00450 | Not Available | - | 97634 - 98980 | 46248.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.