Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | RPAL_RS00355 | Q6NDN9 | + | 73414 - 73728 | 11674.8 |
| lipopolysaccharide assembly protein lapa domain-containing protein | RPAL_RS00360 | Not Available | + | 73766 - 74152 | 13969.3 |
| phosphoribosylanthranilate isomerase | RPAL_RS00365 | B3Q604 | + | 74211 - 74852 | 22722.2 |
| tryptophan synthase subunit beta | RPAL_RS00370 | Q6NDN6 | + | 74866 - 76080 | 43572.5 |
| tryptophan synthase subunit alpha | RPAL_RS00375 | B3Q606 | + | 76080 - 76916 | 28567.5 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | RPAL_RS00380 | B3Q607 | + | 77026 - 78009 | 35868.6 |
| folylpolyglutamate synthase/dihydrofolate synthase family protein | RPAL_RS00385 | P15925 | + | 78006 - 79334 | 47344.6 |
| thioredoxin | RPAL_RS00390 | P10473 | - | 79508 - 79828 | 11253.7 |
| double-strand break repair helicase adda | RPAL_RS00395 | B1YKM8 | - | 79925 - 83410 | 126653.0 |
| double-strand break repair protein addb | RPAL_RS00400 | Not Available | - | 83407 - 86556 | 114316.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.