Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | RPAL_RS00305 | Q8UB32 | - | 63087 - 64415 | 48103.3 |
| caib/baif coa-transferase family protein | RPAL_RS00310 | Not Available | - | 64647 - 65852 | 43260.8 |
| giy-yig nuclease family protein | RPAL_RS00315 | Not Available | - | 65898 - 66134 | 9020.88 |
| Trna-ala | Not Available | Not Available | + | 66535 - 66610 | Not Available |
| tigr02300 family protein | RPAL_RS00325 | Not Available | - | 66681 - 67082 | 14462.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | RPAL_RS00330 | B3Q5Z7 | + | 67223 - 68560 | 46357.1 |
| lysophospholipid acyltransferase family protein | RPAL_RS00335 | Not Available | - | 68564 - 69238 | 24418.3 |
| (d)cmp kinase | RPAL_RS00340 | B3Q5Z9 | + | 69403 - 70041 | 22521.8 |
| 30s ribosomal protein s1 | RPAL_RS00345 | Q6NDP1 | + | 70342 - 72039 | 62804.1 |
| signal peptide peptidase sppa | RPAL_RS00350 | Q55682 | + | 72268 - 73248 | 34646.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.