Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lpta/osta family protein | RPAL_RS00255 | P25893 | + | 53593 - 54258 | 23084.6 |
| lps export abc transporter atp-binding protein | RPAL_RS00260 | P33982 | + | 54376 - 55344 | 35132.2 |
| rna polymerase factor sigma-54 | RPAL_RS00265 | P30333 | + | 55551 - 57197 | 59505.7 |
| ribosome hibernation-promoting factor, hpf/yfia family | RPAL_RS00270 | P30334 | + | 57255 - 57860 | 21975.8 |
| pts iia-like nitrogen regulatory protein ptsn | RPAL_RS00275 | Not Available | + | 58136 - 58597 | 16524.4 |
| duf1150 domain-containing protein | RPAL_RS00280 | Not Available | - | 59203 - 59469 | 9239.93 |
| hsp20 family protein | RPAL_RS00285 | O86110 | - | 59520 - 59945 | 15985.2 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | RPAL_RS00290 | Q6NDQ0 | - | 60099 - 61190 | 38628.1 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | RPAL_RS00295 | Q8YCB0 | - | 61193 - 62041 | 31621.7 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | RPAL_RS00300 | Q8FW09 | - | 62041 - 62922 | 32729.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.