Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | RPAL_RS00205 | Q6NDR5 | - | 45379 - 45579 | 7547.54 |
| translation initiation factor if-3 | RPAL_RS00210 | Q89WH7 | - | 45913 - 46452 | 20557.2 |
| carboxylesterase | RPAL_RS00215 | Q5REX5 | + | 46773 - 47558 | 28354.9 |
| trna epoxyqueuosine(34) reductase queg | RPAL_RS00220 | F7ZDR3 | - | 47716 - 48924 | 43243.6 |
| glutathione s-transferase family protein | RPAL_RS00225 | A0A0H3CDY2 | - | 48873 - 49565 | 26064.2 |
| undecaprenyl-diphosphate phosphatase | RPAL_RS00230 | P60940 | + | 49765 - 50571 | 29342.7 |
| complex i ndufa9 subunit family protein | RPAL_RS00235 | Q9SK66 | - | 50621 - 51586 | 33945.2 |
| Trna-leu | Not Available | Not Available | + | 51747 - 51831 | Not Available |
| ribonuclease d | RPAL_RS00245 | O67779 | + | 52000 - 52614 | 22630.0 |
| lps export abc transporter periplasmic protein lptc | RPAL_RS00250 | Not Available | + | 52844 - 53584 | 26807.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.