Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit i | RPAL_RS00105 | Q03073 | - | 20369 - 22015 | 61591.7 |
| 2-dehydropantoate 2-reductase | RPAL_RS00110 | O31717 | - | 22326 - 23246 | 32428.5 |
| sdr family oxidoreductase | RPAL_RS00115 | Not Available | - | 23320 - 24057 | 26656.0 |
| 2-hydroxychromene-2-carboxylate isomerase | RPAL_RS00120 | Not Available | - | 24176 - 24778 | 22348.9 |
| glutathione s-transferase | RPAL_RS00125 | Q9P6M1 | + | 24994 - 25662 | 24963.2 |
| nad(p)-dependent oxidoreductase | RPAL_RS00130 | Q66KC4 | - | 25778 - 26653 | 30715.5 |
| gamma-glutamyltransferase | RPAL_RS00135 | Not Available | - | 26926 - 28659 | 60495.6 |
| mfs transporter | RPAL_RS00140 | Not Available | + | 28765 - 30162 | 49103.9 |
| 3-deoxy-7-phosphoheptulonate synthase | RPAL_RS00145 | P0AB92 | + | 30377 - 31471 | 38523.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | RPAL_RS00150 | Q89WU7 | - | 31529 - 33121 | 55981.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.