Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPAL_RS27205 | Not Available | - | 33 - 230 | 7030.22 |
| chromosomal replication initiator protein dnaa | RPAL_RS00005 | B3QJZ9 | + | 220 - 1638 | 52568.9 |
| dna polymerase iii subunit beta | RPAL_RS00010 | P0CAU5 | + | 1872 - 2990 | 40460.4 |
| dna replication/repair protein recf | RPAL_RS00015 | Q8UJ65 | + | 3234 - 4373 | 40621.5 |
| dna topoisomerase (atp-hydrolyzing) subunit b | RPAL_RS00020 | P0CAX1 | + | 4590 - 7031 | 89297.2 |
| 4-hydroxyphenylpyruvate dioxygenase | RPAL_RS00025 | P80064 | - | 7213 - 8331 | 40715.1 |
| lrp/asnc family transcriptional regulator | RPAL_RS00030 | P56901 | + | 8457 - 8936 | 17636.2 |
| hwe histidine kinase domain-containing protein | RPAL_RS00035 | Not Available | - | 8982 - 10430 | 51087.9 |
| circadian clock kaib family protein | RPAL_RS00040 | P73859 | - | 10430 - 10714 | 10217.7 |
| circadian clock protein kaic | RPAL_RS00045 | P73860 | - | 10724 - 12415 | 61936.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.