Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sa1788 family pvl leukocidin-associated protein | RPAL_RS19715 | Not Available | + | 4273298 - 4273720 | 16146.3 |
| head-tail connector protein | RPAL_RS19720 | Not Available | + | 4273735 - 4274016 | 10090.9 |
| duf3168 domain-containing protein | RPAL_RS26580 | Not Available | + | 4274018 - 4274434 | 14791.8 |
| phage head closure protein | RPAL_RS19730 | Not Available | + | 4274434 - 4274754 | 11937.2 |
| hypothetical protein | RPAL_RS19735 | Not Available | + | 4274751 - 4275137 | 14439.3 |
| p27 family phage terminase small subunit | RPAL_RS19740 | Not Available | + | 4275176 - 4275511 | 12360.7 |
| Terminase large subunit | RPAL_RS19745 | Not Available | + | 4275486 - 4277108 | 59977.3 |
| hk97-gp10 family putative phage morphogenesis protein | RPAL_RS26585 | Not Available | + | 4277108 - 4277503 | 14402.4 |
| gene transfer agent family protein | RPAL_RS19755 | Not Available | + | 4277500 - 4277832 | 11592.7 |
| Tail tape measure protein | RPAL_RS19760 | Not Available | + | 4277832 - 4280048 | 76884.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.