Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Integrase | RPAL_RS14990 | Not Available | - | 3287489 - 3288490 | 38049.3 |
| Excisionase | RPAL_RS14995 | Not Available | - | 3288516 - 3288749 | 8429.82 |
| hypothetical protein | RPAL_RS15000 | Not Available | - | 3288758 - 3289210 | 16821.8 |
| Restriction endonuclease-like | RPAL_RS15005 | Not Available | - | 3289212 - 3289610 | 15118.2 |
| hypothetical protein | RPAL_RS15010 | Not Available | - | 3289607 - 3289858 | 9735.84 |
| Ninb family protein | RPAL_RS15015 | Not Available | - | 3289855 - 3290271 | 15813.9 |
| j domain-containing protein | RPAL_RS15020 | Not Available | - | 3290268 - 3290873 | 22179.4 |
| Hypothetical protein | RPAL_RS15025 | Not Available | - | 3291088 - 3291714 | 23719.3 |
| Hypothetical protein | RPAL_RS26510 | Not Available | - | 3291725 - 3292738 | 37024.3 |
| Hypothetical protein | RPAL_RS26515 | Not Available | - | 3292743 - 3293534 | 28321.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.