Sorangium cellulosum So ce56

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Order

Polyangiales

Family

Polyangiaceae

Genus

Sorangium

Description

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
Class/taxonomy?kingdom=Pseudomonadati&level=klass&phylum=Myxococcota
OrderPolyangiales
FamilyPolyangiaceae
GenusSorangium
SpeciesSorangium cellulosum
StrainSo ce56

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sorangium cellulosum So ce56


Gene Summary

Adenine Count

1871082 bp

Thymine Count

1859741 bp

Guanine Count

4653678 bp

Cytosine Count

4649278 bp

Genome Length

13033779 bp

Protein-coding Genes

9620 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaSCE_RS00005Not Available+1 - 141653081.6
serine/threonine-protein kinase pknkSCE_RS47905Not Available-1450 - 5367140565.0
molecular chaperone dnakSCE_RS00015Not Available-5488 - 735066509.4
nucleotide exchange factor grpeSCE_RS00020Not Available-7538 - 812221075.6
aspartate aminotransferase family proteinSCE_RS00025Not Available+8397 - 965943717.6
had-ic family p-type atpaseSCE_RS00030Not Available+9661 - 1210882808.7
fur family transcriptional regulatorSCE_RS00035Not Available-12157 - 1266919056.6
hypothetical proteinSCE_RS00040Not Available-12768 - 1382938125.6
hypothetical proteinSCE_RS00045Not Available-13900 - 1469728821.7
heat-inducible transcriptional repressor hrcaSCE_RS00050Not Available+15042 - 1608537519.1

Displaying genes 1 – 10 of 9695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1753 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da

Displaying 1–10 of 1753 metabolites