Xanthobacter autotrophicus Py2

Gram-negativeBacilliMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Xanthobacteraceae

Genus

Xanthobacter

Description

A propene oxidizer able to degrade trichloroethylene when it is grown on propene because of the presence of propene monooxygenase. Xanthobacter autotrophicus Py2, an aerobic bacterium, was isolated following enrichment on propene and 1-butene. It is able degrade trichloroethylene when grown on propene due to the presence of a propene monooxygenase. It also degrades alkenes, epoxides and ketones. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyXanthobacteraceae
GenusXanthobacter
SpeciesXanthobacter versatilis
StrainPy2

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceMethylotroph
PathogenicityNo

Genome Summary

Xanthobacter autotrophicus Py2


Gene Summary

Adenine Count

857264 bp

Thymine Count

870014 bp

Guanine Count

1812851 bp

Cytosine Count

1768805 bp

Genome Length

5308934 bp

Protein-coding Genes

4747 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Portal proteinXAUT_RS15825Not Available+3499795 - 350097642484.7
giy-yig nuclease family proteinXAUT_RS15830Not Available+3501059 - 350134911390.6
hypothetical proteinXAUT_RS15835Not Available+3501601 - 35017896987.46
hypothetical proteinXAUT_RS27600Not Available+3501814 - 35020117042.58
Putative prohead proteaseXAUT_RS27605Not Available+3502015 - 350249416996.6
Putative major capsid proteinXAUT_RS15850Not Available+3502522 - 350380845217.3
Putative tape measure proteinXAUT_RS15855Not Available-3504095 - 350506033332.0
trypsin-like serine proteaseXAUT_RS15860Not Available-3505063 - 350580924360.6
Dna packaging/head-tail-connectorXAUT_RS15865Not Available+3506076 - 350663919762.9
Head-tail connector complex proteinXAUT_RS15870Not Available+3506636 - 350695611718.0

Displaying genes 1 – 10 of 5237 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

61 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017450(R) 2,3-Dihydroxy-3-methylvalerateC6H12O4Chemical structure of (R) 2,3-Dihydroxy-3-methylvalerate562-43-6
Average148.1571Da
Monoisotopic148.073558872Da
BASm0017553N-(5-Phospho-D-ribosyl)anthranilateC12H16NO9PChemical structure of N-(5-Phospho-D-ribosyl)anthranilate4220-99-9
Average349.2305Da
Monoisotopic349.056267627Da
BASm0017645Cyclic pyranopterin monophosphateC10H14N5O8PChemical structure of Cyclic pyranopterin monophosphateNULL
Average363.2206Da
Monoisotopic363.057998961Da
BASm0019129PolyphosphateH5O10P3Chemical structure of PolyphosphateNULL
Average257.955Da
Monoisotopic257.909555916Da
BASm00191503b-AllotetrahydrocortisolC19H35N5O6SeChemical structure of 3b-AllotetrahydrocortisolNULL
Average508.489Da
Monoisotopic509.175256Da
BASm00199645-(methylsulfanyl)-2,3-dioxopentyl phosphateC6H11O6PSChemical structure of 5-(methylsulfanyl)-2,3-dioxopentyl phosphateNULL
Average242.187Da
Monoisotopic242.001395286Da
BASm00202981,1-Diethoxy ethaneC6H14O2Chemical structure of 1,1-Diethoxy ethane75-07-0
Average118.1742Da
Monoisotopic118.099379692Da
BASm0020478Geranyl acetoneC13H22OChemical structure of Geranyl acetone67-64-1
Average194.318Da
Monoisotopic194.167065328Da
BASm0034704coenzyme B12C72H100CoN18O17PChemical structure of coenzyme B12NULL
Average1579.608Da
Monoisotopic1578.65834Da
BASm0034729delta7-AvenasterolC29H48OChemical structure of delta7-AvenasterolNULL
Average412.702Da
Monoisotopic412.370516166Da

Displaying 51–60 of 61 metabolites