Synechococcus sp. RCC307 genomic sequence.

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. RCC307
Straingenomic sequence.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Synechococcus sp. RCC307 genomic sequence.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBeibu Gulf
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. RCC307 genomic sequence.

NC_009482.1

Gene Summary

Adenine Count

436514 bp

Thymine Count

434684 bp

Guanine Count

676209 bp

Cytosine Count

677506 bp

Genome Length

2224914 bp

Protein-coding Genes

2409 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nucleotide exchange factor grpeSYNRCC307_RS00105Not Available+24030 - 2471624820.7
molecular chaperone dnajSYNRCC307_RS00110Not Available+24716 - 2582539312.5
sulfurtransferase tusa family proteinSYNRCC307_RS00115Not Available+25826 - 260537973.63
ribosome small subunit-dependent gtpase aSYNRCC307_RS00120Not Available+26046 - 2691231566.2
ybab/ebfc family nucleoid-associated proteinSYNRCC307_RS00125Not Available-26914 - 2724911836.0
udp-n-acetylmuramate dehydrogenaseSYNRCC307_RS00130Not Available-27274 - 2819132205.4
udp-n-acetylmuramate--l-alanine ligaseSYNRCC307_RS00135Not Available-28195 - 2963450459.6
type i glyceraldehyde-3-phosphate dehydrogenaseSYNRCC307_RS00140Not Available+29778 - 3080337049.1
thiamine-phosphate kinaseSYNRCC307_RS00145Not Available-30819 - 3179634808.0
peptidylprolyl isomeraseSYNRCC307_RS00150Not Available-31789 - 3295842307.3

Displaying genes 21 – 30 of 2458 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

196 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001475erythronolide BC21H38O7Chemical structure of erythronolide BNot available
Average402.528Da
Monoisotopic402.2617536Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm00016962-heptyl-3-hydroxy-4(1H)-quinoloneC16H21NO2Chemical structure of 2-heptyl-3-hydroxy-4(1H)-quinoloneNot available
Average259.349Da
Monoisotopic259.15722892Da
BASm0001808corynebactinC39H42N6O18Chemical structure of corynebactinNot available
Average882.789Da
Monoisotopic882.2555585Da

Displaying 1–10 of 196 metabolites