Pelotomaculum thermopropionicum SI

Gram-positiveMotileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Desulfotomaculaceae

Genus

Pelotomaculum

Description

Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) is a non-halophilic thermophilic anaerobic bacterium phylogenetically associated with the Firmicutes. Pelotomaculum thermopropionicum was isolated from granular sludge from a thermophilic upflow anaerobic sludge blanket (UASB) reactor. It was isolated both in pure culture and in co-culture with methanogens. Pelotomaculum thermopropionicum oxidizes volatile fatty acids and alcohols in syntrophic association with methanogenic archaea. It can utilize propionate, ethanol, lactate, ethylene glycol, 1-butanol, 1-propanol, 1-pentanol and 1,3-propanediol. In pure culture, Pelotomaculum thermopropionicum can ferment pyruvate and fumarate. Fumarate can also be used as an electron acceptor in the presence of propionate, ethanol or lactate as an electron donor. This is the first mesophilic, syntropic propionate-oxidizing species known which is not a member of the delta-proteobacteria. (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyDesulfotomaculaceae
GenusPelotomaculum
SpeciesPelotomaculum thermopropionicum
StrainSI

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature55
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pelotomaculum thermopropionicum SI

NC_009454.1

Gene Summary

Adenine Count

716087 bp

Thymine Count

707016 bp

Guanine Count

804073 bp

Cytosine Count

798199 bp

Genome Length

3025375 bp

Protein-coding Genes

2898 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttrNot AvailableNot Available+2299032 - 2299043Not Available
chromosomal replication initiator protein dnaaPTH_RS00005Not Available+1 - 134451540.0
dna polymerase iii subunit betaPTH_RS00010Not Available+1494 - 260340618.7
dna replication/repair protein recfPTH_RS00015Not Available+2628 - 372242034.9
extracellular matrix regulator rembPTH_RS00020Not Available+3741 - 39899402.4
dna topoisomerase (atp-hydrolyzing) subunit bPTH_RS00025Not Available+4049 - 598071291.7
methyl-accepting chemotaxis proteinPTH_RS14995Not Available-6049 - 763856669.7
hypothetical proteinPTH_RS00035Not Available+8063 - 835610921.4
dna gyrase subunit aPTH_RS00040Not Available+8894 - 1132090344.9
pyridoxal 5'-phosphate synthase lyase subunit pdxsPTH_RS00045Not Available+11634 - 1251831465.6

Displaying genes 61 – 70 of 3002 in total

Metabolites

55 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002243S-methyl-5'-thioinosineC11H14N4O4SChemical structure of S-methyl-5'-thioinosineNot available
Average298.32Da
Monoisotopic298.0735761Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da

Displaying 1–10 of 55 metabolites