Metallosphaera sedula DSM 5348

Gram-negativeCocciNon-motileAerobe

Kingdom

Thermoproteati

Phylum

Thermoproteota

Class

Thermoprotei

Order

Sulfolobales

Family

Sulfolobaceae

Genus

Metallosphaera

Description

Metallosphaera sedula (strain ATCC 51363 / DSM 5348) is a thermophilic aerobic archaeon phylogenetically associated with the kingdom Crenarchaeota. Metallosphaera sedula (strain ATCC 51363 / DSM 5348) was isolated from a thermal pond in the Pisciarelli Solfatara in Italy. This organism is able to leach metals from sulfidic ores making it a potential bioleaching agent. The rate of oxidation of iron pyrite for this organism is increased under conditions of thermal and chemical stress. The genome sequence will provide information on the production and regulation of enzymes involved in the biooxidation of metals. (HAMAP: METS5)

Taxonomy

KingdomThermoproteati
PhylumThermoproteota
ClassThermoprotei
OrderSulfolobales
FamilySulfolobaceae
GenusMetallosphaera
SpeciesMetallosphaera sedula
StrainDSM 5348

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Metallosphaera sedula DSM 5348
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature70
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Metallosphaera sedula DSM 5348

Accession NumberNC_009440.1

Gene Summary

Adenine Count

593176 bp

Thymine Count

585305 bp

Guanine Count

513726 bp

Cytosine Count

499310 bp

Genome Length

2191517 bp

Protein-coding Genes

2359 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
threonine ammonia-lyaseMSED_RS00055Not Available+7850 - 905844147.1
prephenate dehydrataseMSED_RS00060Not Available+9137 - 992529354.3
lrp/asnc family transcriptional regulatorMSED_RS00065Not Available-9918 - 1088336942.1
nad(p)/fad-dependent oxidoreductaseMSED_RS00070Not Available-10929 - 1233551771.5
adenylosuccinate synthetaseMSED_RS00075Not Available-12337 - 1335036900.5
formate-- phosphoribosylaminoimidazolecarboxamide ligase family proteinMSED_RS00080Not Available-13486 - 1452940006.4
formate-- phosphoribosylaminoimidazolecarboxamide ligaseMSED_RS00085Not Available-14526 - 1552437744.6
adenylosuccinate lyaseMSED_RS00090Not Available+15575 - 1695151800.9
Trna-thrNot AvailableNot Available+16975 - 17060Not Available
thiamine-phosphate kinaseMSED_RS00100Not Available+17075 - 1801634668.7

Displaying genes 11 – 20 of 2406 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

121 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da

Displaying 1–10 of 121 metabolites