Pyrobaculum islandicum DSM 4184

BacilliNon-motileAnaerobic

Kingdom

Thermoproteati

Phylum

Thermoproteota

Class

Thermoprotei

Order

Thermoproteales

Family

Thermoproteaceae

Genus

Pyrobaculum

Description

Pyrobaculum islandicum (strain DSM 4184 / JCM9189) is a hyperthermophilic archaeon isolated from water from a geothermal power plant in Iceland. This organism is able to grow at 95 degrees Celsius autotrophically, heterotrophically (lithotrophically and organotrophically), and mixotrophically using hydrogen or organic matter (acetate) as the electron donors and sulfur, sulfite, and thiosulfate as electron acceptors. (HAMAP: PYRIL)

Taxonomy

KingdomThermoproteati
PhylumThermoproteota
ClassThermoprotei
OrderThermoproteales
FamilyThermoproteaceae
GenusPyrobaculum
SpeciesPyrobaculum islandicum
StrainDSM 4184

Profile

Physiology
Gram staining propertiesNot Available
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature100
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pyrobaculum islandicum DSM 4184

Accession NumberNC_008701.1

Gene Summary

Adenine Count

460654 bp

Thymine Count

459870 bp

Guanine Count

453771 bp

Cytosine Count

452107 bp

Genome Length

1826402 bp

Protein-coding Genes

2145 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
diphthine--ammonia ligasePISL_RS10400Not Available+106295 - 10670414887.7
tigr04053 family radical sam/spasm domain-containing proteinPISL_RS00595Q30Y73-106854 - 10796641349.2
glutamate-1-semialdehyde 2,1-aminomutasePISL_RS00600A1RQR5-107969 - 10924345778.2
uroporphyrinogen-iii c-methyltransferasePISL_RS00605Q55749+109288 - 11002226169.8
uroporphyrinogen-iii synthasePISL_RS00610Not Available+109995 - 11064222762.1
hypothetical proteinPISL_RS00615Q8ZSL3-110625 - 1108226822.55
helix-turn-helix domain-containing proteinPISL_RS00620Not Available+111061 - 11164522697.6
hypothetical proteinPISL_RS11225Not Available+111706 - 1118976731.88
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatasePISL_RS00625Not Available+112239 - 11289524625.9
hypothetical proteinPISL_RS00630Not Available-112927 - 1131638406.38

Displaying genes 121 – 130 of 2186 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

123 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000590phloretateC9H9O3Chemical structure of phloretateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da

Displaying 1–10 of 123 metabolites