Myxococcus xanthus DK 1622

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Myxococcaceae

Genus

Myxococcus

Description

Myxococcus xanthus is a Gram-negative rod-shaped bacterium. Under starvation conditions, it undergoes a developmental process in which roughly 100,000 individual cells aggregate to form a structure called the fruiting body. Inside this structure, rod-shaped cells differentiate into spherical, thick-walled spores. Biochemical changes, such as the synthesis of new proteins and alterations in the cell wall, occur in parallel to the morphological changes. During the aggregation of M.xanthus cells into fruiting bodies, dense ridges of cells appear to move in traveling waves called ripples. Coordinated cell motility, or swarming, also occurs during vegetative growth, facilitating predatory feeding by increasing the extracellular concentration of digestive enzymes secreted by the bacteria. M.xanthus moves across surfaces by means of a poorly understood mechanism known as gliding motility. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyMyxococcaceae
GenusMyxococcus
SpeciesMyxococcus xanthus
StrainDK 1622

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Myxococcus xanthus DK 1622
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature20
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationSporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Myxococcus xanthus DK 1622

Accession NumberNC_008095.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Large packaging proteinMXAN_RS05845Not Available+1423462 - 142487751290.3
Portal proteinMXAN_RS05850Not Available+1424904 - 142623248675.9
1_nc_021804: prohead proteaseMXAN_RS05855Not Available+1426268 - 142706229197.6
Gp6, major capsid head proteinMXAN_RS05860Not Available+1427059 - 142814738729.2
Hypothetical proteinMXAN_RS05865Not Available+1428159 - 142857213685.3
hypothetical proteinMXAN_RS05870Not Available+1428665 - 142932122866.1
hypothetical proteinMXAN_RS05875Not Available+1429321 - 142964412016.3
minor capsid proteinMXAN_RS05880Not Available+1429644 - 143006314701.2
hypothetical proteinMXAN_RS05885Not Available+1430100 - 143051615003.1
phage tail tube proteinMXAN_RS05890Not Available+1430528 - 143095314720.0

Displaying genes 1 – 10 of 7387 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

165 records
Metabolite IDMetabolite nameStructureCAS number
BASm0020164PA(14:1(9Z)/16:0)C33H63O8PChemical structure of PA(14:1(9Z)/16:0)NULL
Average618.8223Da
Monoisotopic618.426055504Da
BASm0020166PA(16:1(9Z)/18:1(9Z))C37H69O8PChemical structure of PA(16:1(9Z)/18:1(9Z))NULL
Average672.9127Da
Monoisotopic672.473005696Da
BASm0020169PA(18:0/18:1(9Z))C39H75O8PChemical structure of PA(18:0/18:1(9Z))384833-24-3
Average702.9818Da
Monoisotopic702.519955888Da
BASm0020176PE(14:1(9Z)/16:0)C35H68NO8PChemical structure of PE(14:1(9Z)/16:0)NULL
Average661.8901Da
Monoisotopic661.468254669Da
BASm0020207PS(12:0/16:0)C34H66NO10PChemical structure of PS(12:0/16:0)NULL
Average679.8623Da
Monoisotopic679.442433849Da
BASm0020208PS(12:0/16:1(9Z))C34H64NO10PChemical structure of PS(12:0/16:1(9Z))NULL
Average677.8464Da
Monoisotopic677.426783785Da
BASm0020209PS(14:1(9Z)/16:0)C36H68NO10PChemical structure of PS(14:1(9Z)/16:0)NULL
Average705.8996Da
Monoisotopic705.458083913Da
BASm0030785CDP-DG(12:0/18:1(11Z))C42H75N3O15P2Chemical structure of CDP-DG(12:0/18:1(11Z))NULL
Average924.016Da
Monoisotopic923.467342723Da
BASm0030809CDP-DG(14:0/18:1(11Z))C44H79N3O15P2Chemical structure of CDP-DG(14:0/18:1(11Z))NULL
Average952.07Da
Monoisotopic951.498642852Da
BASm0030858CDP-DG(14:1(9Z)/16:0)C42H75N3O15P2Chemical structure of CDP-DG(14:1(9Z)/16:0)NULL
Average924.016Da
Monoisotopic923.467342723Da

Displaying 141–150 of 165 metabolites