Myxococcus xanthus DK 1622

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Myxococcaceae

Genus

Myxococcus

Description

Myxococcus xanthus is a Gram-negative rod-shaped bacterium. Under starvation conditions, it undergoes a developmental process in which roughly 100,000 individual cells aggregate to form a structure called the fruiting body. Inside this structure, rod-shaped cells differentiate into spherical, thick-walled spores. Biochemical changes, such as the synthesis of new proteins and alterations in the cell wall, occur in parallel to the morphological changes. During the aggregation of M.xanthus cells into fruiting bodies, dense ridges of cells appear to move in traveling waves called ripples. Coordinated cell motility, or swarming, also occurs during vegetative growth, facilitating predatory feeding by increasing the extracellular concentration of digestive enzymes secreted by the bacteria. M.xanthus moves across surfaces by means of a poorly understood mechanism known as gliding motility. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyMyxococcaceae
GenusMyxococcus
SpeciesMyxococcus xanthus
StrainDK 1622

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Myxococcus xanthus DK 1622
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature20
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationSporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Myxococcus xanthus DK 1622

Accession NumberNC_008095.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Large packaging proteinMXAN_RS05845Not Available+1423462 - 142487751290.3
Portal proteinMXAN_RS05850Not Available+1424904 - 142623248675.9
1_nc_021804: prohead proteaseMXAN_RS05855Not Available+1426268 - 142706229197.6
Gp6, major capsid head proteinMXAN_RS05860Not Available+1427059 - 142814738729.2
Hypothetical proteinMXAN_RS05865Not Available+1428159 - 142857213685.3
hypothetical proteinMXAN_RS05870Not Available+1428665 - 142932122866.1
hypothetical proteinMXAN_RS05875Not Available+1429321 - 142964412016.3
minor capsid proteinMXAN_RS05880Not Available+1429644 - 143006314701.2
hypothetical proteinMXAN_RS05885Not Available+1430100 - 143051615003.1
phage tail tube proteinMXAN_RS05890Not Available+1430528 - 143095314720.0

Displaying genes 1 – 10 of 7387 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

165 records
Metabolite IDMetabolite nameStructureCAS number
BASm0019539PGP(19:1(9Z)/12:0)C37H72O13P2Chemical structure of PGP(19:1(9Z)/12:0)NULL
Average786.918Da
Monoisotopic786.444816374Da
BASm0019595PE(19:1(9Z)/10:0)C34H66NO8PChemical structure of PE(19:1(9Z)/10:0)NULL
Average647.875Da
Monoisotopic647.452605087Da
BASm0019596PE(19:1(9Z)/12:0)C36H70NO8PChemical structure of PE(19:1(9Z)/12:0)NULL
Average675.929Da
Monoisotopic675.483905216Da
BASm0019681CDP-DG(14:0/14:0)C40H73N3O15P2Chemical structure of CDP-DG(14:0/14:0)NULL
Average897.978Da
Monoisotopic897.451692659Da
BASm0019931N-Acetylglutamic acidC7H11NO5Chemical structure of N-Acetylglutamic acid1188-37-0
Average189.1659Da
Monoisotopic189.063722467Da
BASm00200002-trans,6-trans,10-trans-Geranylgeranyl diphosphateC20H36O7P2Chemical structure of 2-trans,6-trans,10-trans-Geranylgeranyl diphosphate6699-20-3
Average450.4432Da
Monoisotopic450.19362653Da
BASm0020025myristoyl-CoAC35H62N7O17P3SChemical structure of myristoyl-CoA3130-72-1
Average977.89Da
Monoisotopic977.313573819Da
BASm0020027oleoyl-CoAC39H68N7O17P3SChemical structure of oleoyl-CoA1716-06-9
Average1031.98Da
Monoisotopic1031.360524011Da
BASm0020161PA(12:0/16:0)C31H61O8PChemical structure of PA(12:0/16:0)NULL
Average592.785Da
Monoisotopic592.41040544Da
BASm0020162PA(12:0/16:1(9Z))C31H59O8PChemical structure of PA(12:0/16:1(9Z))NULL
Average590.7691Da
Monoisotopic590.394755376Da

Displaying 131–140 of 165 metabolites