Myxococcus xanthus DK 1622

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Myxococcaceae

Genus

Myxococcus

Description

Myxococcus xanthus is a Gram-negative rod-shaped bacterium. Under starvation conditions, it undergoes a developmental process in which roughly 100,000 individual cells aggregate to form a structure called the fruiting body. Inside this structure, rod-shaped cells differentiate into spherical, thick-walled spores. Biochemical changes, such as the synthesis of new proteins and alterations in the cell wall, occur in parallel to the morphological changes. During the aggregation of M.xanthus cells into fruiting bodies, dense ridges of cells appear to move in traveling waves called ripples. Coordinated cell motility, or swarming, also occurs during vegetative growth, facilitating predatory feeding by increasing the extracellular concentration of digestive enzymes secreted by the bacteria. M.xanthus moves across surfaces by means of a poorly understood mechanism known as gliding motility. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyMyxococcaceae
GenusMyxococcus
SpeciesMyxococcus xanthus
StrainDK 1622

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Myxococcus xanthus DK 1622
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature20
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationSporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Myxococcus xanthus DK 1622

Accession NumberNC_008095.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
m16 family metallopeptidaseMXAN_RS00045Not Available+7044 - 856153275.9
hypothetical proteinMXAN_RS00050Not Available-8667 - 897511718.2
mfs transporterMXAN_RS00055Not Available-9261 - 1049643413.2
capa family proteinMXAN_RS00060Not Available-10660 - 1227656380.6
doxx family proteinMXAN_RS00065Not Available-12409 - 1291517879.4
hypothetical proteinMXAN_RS00070Not Available+13129 - 1404932774.1
trna1(val) (adenine(37)-n6)-methyltransferaseMXAN_RS00075Not Available-14066 - 1484527519.2
type ii toxin-antitoxin system hipa family toxin yjjjMXAN_RS00080Not Available+15080 - 1639048299.4
phb depolymerase family esteraseMXAN_RS00085Not Available-16412 - 1830765693.3
glutathione synthaseMXAN_RS00090Not Available-18526 - 1949435557.0

Displaying genes 41 – 50 of 7387 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

165 records
Metabolite IDMetabolite nameStructureCAS number
BASm0019198PS(18:0/18:1(9Z))C42H80NO10PChemical structure of PS(18:0/18:1(9Z))NULL
Average790.073Da
Monoisotopic789.551984778Da
BASm0019212PS(16:0/18:1(9Z))C40H76NO10PChemical structure of PS(16:0/18:1(9Z))NULL
Average762.019Da
Monoisotopic761.520684649Da
BASm0019214PS(16:1(9Z)/18:1(9Z))C40H74NO10PChemical structure of PS(16:1(9Z)/18:1(9Z))NULL
Average760.003Da
Monoisotopic759.505034585Da
BASm0019325PGP(18:1(9Z)/12:0)C36H70O13P2Chemical structure of PGP(18:1(9Z)/12:0)NULL
Average772.891Da
Monoisotopic772.42916631Da
BASm0019328PGP(19:0/14:0)C39H78O13P2Chemical structure of PGP(19:0/14:0)NULL
Average816.988Da
Monoisotopic816.491766568Da
BASm0019329PGP(19:0/16:0)C41H82O13P2Chemical structure of PGP(19:0/16:0)NULL
Average845.042Da
Monoisotopic844.523066696Da
BASm0019340PE(18:1(9Z)/12:0)C35H68NO8PChemical structure of PE(18:1(9Z)/12:0)NULL
Average661.902Da
Monoisotopic661.468255152Da
BASm0019400PG(16:0/17:0cycw7c)C39H75O10PChemical structure of PG(16:0/17:0cycw7c)NULL
Average734.993Da
Monoisotopic734.509785613Da
BASm0019521PGP(18:1(9Z)/14:0(3-OH))C38H74O14P2Chemical structure of PGP(18:1(9Z)/14:0(3-OH))NULL
Average816.944Da
Monoisotopic816.455381059Da
BASm0019538PGP(19:1(9Z)/10:0)C35H68O13P2Chemical structure of PGP(19:1(9Z)/10:0)NULL
Average758.864Da
Monoisotopic758.413516246Da

Displaying 121–130 of 165 metabolites