Jannaschia sp. CCS1

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Jannaschia

Description

Jannaschia sp. strain CCS1 is a member of the Roseobacter lineage (alpha-Proteobacteria), an ecologically relevant taxon of marine bacteria abundant in coastal and open ocean surface waters. CCS1 is an aerobic anoxygenic phototroph (AAnP), that is, it is incapable of anaerobic photosynthesis, and performs efficient photoinduced electron transfer only under aerobic conditions. However it still uses bacteriochlorophyll a to harvest energy from light without oxygen formation. AAnPs have recently been found in ocean surface waters, where they make up a significant fraction of the marine bacterioplankton community, are responsible for a share of the oceanic photosynthetic electron transport flux, and have important implications for the ocean carbon cycle. Jannaschia CCS1 was isolated from Pacific coastal waters on low-nutrient seawater medium. It is motile, grows slowly, and like other marine AAnPs, produces bacteriochlorophyll a when grown in the dark. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusJannaschia
SpeciesJannaschia sp. CCS1
StrainCCS1

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Jannaschia sp. CCS1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains
SporulationNonsporulating
Energy sourcePhototroph- Heterotroph
PathogenicityNo

Genome Summary

Jannaschia sp. CCS1

Accession NumberNC_007801.1

Gene Summary

Adenine Count

18645 bp

Thymine Count

17665 bp

Guanine Count

24651 bp

Cytosine Count

25111 bp

Genome Length

86072 bp

Protein-coding Genes

74 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
abc transporter permeaseJANN_RS01565Not Available+315059 - 31659453653.6
glycosyltransferase family 4 proteinJANN_RS01570Not Available+316591 - 31763436599.8
fkbm family methyltransferaseJANN_RS21795Not Available+317627 - 31836126628.6
Trna-argNot AvailableNot Available+318356 - 318432Not Available
laci family dna-binding transcriptional regulatorJANN_RS01585Not Available+318576 - 31956235276.2
zinc abc transporter substrate-binding proteinJANN_RS01590Not Available-319760 - 32084838934.1
transcriptional repressorJANN_RS01595Not Available+320905 - 32142318305.7
metal abc transporter atp-binding proteinJANN_RS01600Not Available+321420 - 32215126055.6
metal abc transporter permeaseJANN_RS01605Not Available+322151 - 32294827465.6
l-serine ammonia-lyaseJANN_RS01610Not Available-323077 - 32448949297.7

Displaying genes 331 – 340 of 4386 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 88 metabolites