Thermus thermophilus HB27

Gram-negativeNAAerobe

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Thermus

Description

Thermus thermophilus is an extremely thermophilic, halotolerant bacterium. It was isolated from a natural thermal environment in Japan. It has an optimal growth temperature of about 85 Celsius degrees. Thermus thermophilus has become a model organism in structural biology and some of its enzymes have a biotechnological application. (HAMAP: THET2)

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderThermales
FamilyThermaceae
GenusThermus
SpeciesThermus thermophilus
StrainHB27

Profile

Physiology
Gram staining propertiesNegative
ShapeNA
MobilityNA
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature0
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Thermus thermophilus HB27


Gene Summary

Adenine Count

290642 bp

Thymine Count

288484 bp

Guanine Count

659053 bp

Cytosine Count

656698 bp

Genome Length

1894877 bp

Protein-coding Genes

1998 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
is4-like element istth2 family transposaseTT_RS00005Not Available-74 - 117141632.4
sdr family nad(p)-dependent oxidoreductaseTT_RS00010Not Available+1281 - 205126962.7
nad(p)/fad-dependent oxidoreductaseTT_RS00015Not Available-2097 - 263919139.1
pasta domain-containing proteinTT_RS00020Not Available+2666 - 398547665.8
yran family proteinTT_RS00025Not Available+3973 - 431112866.8
menaquinone biosynthesis decarboxylaseTT_RS00030Not Available+4326 - 613466557.3
flavodoxin family proteinTT_RS00035Not Available+6172 - 682223334.2
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabTT_RS00040Not Available-6969 - 751719697.1
carbohydrate abc transporter permeaseTT_RS00045Not Available+7549 - 874544623.4
carbohydrate abc transporter permeaseTT_RS00050Not Available+8795 - 992841446.8

Displaying genes 1 – 10 of 2287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

325 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da

Displaying 1–10 of 325 metabolites