Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi strain DSS-3. Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. DSS-3 is the type strain for this species. Analysis will provide insight into sulfur cycling by microbes in marine environments. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
gene transfer agent family proteinSPO_RS11445Not Available-2400247 - 240056710928.3
Gene transfer aget (gta) orfg9-like phage major tail proteinSPO_RS11450Not Available-2400570 - 240098314270.6
duf3168 domain-containing proteinSPO_RS11455Not Available-2401008 - 240142114236.7
phage head closure proteinSPO_RS11460Not Available-2401418 - 240175612077.2
head-tail connector proteinSPO_RS11465Not Available-2401753 - 240235221383.8
Phage major capsid proteinSPO_RS11470Not Available-2402517 - 240369542010.4
Putative prohead proteaseSPO_RS11475P49860-2403729 - 240428620347.1
hypothetical proteinSPO_RS11480Not Available-2404315 - 24045398334.1
Portal proteinSPO_RS11485Q1RIH4-2404532 - 240570442246.2
Terminase large subunitSPO_RS11490Not Available-2405830 - 240705644307.9

Displaying genes 11 – 20 of 4001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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