Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi strain DSS-3. Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. DSS-3 is the type strain for this species. Analysis will provide insight into sulfur cycling by microbes in marine environments. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Cysteine synthaseSPO_RS11395D2Z027-2390628 - 239169237672.0
serine o-acetyltransferaseSPO_RS11400P29847-2391972 - 239278429618.9
trar/dksa c4-type zinc finger proteinSPO_RS11405Not Available+2392851 - 239320712812.4
hypothetical proteinSPO_RS11410Not Available-2393188 - 239348410595.8
Tail proteinSPO_RS11415Not Available-2393488 - 2397414142196.0
Phage cell wall peptidaseSPO_RS11420Not Available-2397414 - 239786016179.4
Minor tail proteinSPO_RS11425Not Available-2397857 - 239874432178.0
Tail proteinSPO_RS11430Not Available-2398744 - 239937623549.6
Putative tail tape measure proteinSPO_RS11435Not Available-2399392 - 240005422620.2
rcc01693 family proteinSPO_RS11440Not Available-2400041 - 24002507392.91

Displaying genes 1 – 10 of 4001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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