Sediminicola luteus strain HQA918

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Sediminicola

Description

Sediminicola luteus strain HQA918 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and is non-spore-forming. Optimal growth occurs at a temperature of 16.0°C, suggesting a preference for cooler environments, which may be indicative of its ecological niche in specific terrestrial or aquatic ecosystems. As a member of the Sediminicola genus, this strain likely plays a role in the degradation of organic matter, contributing to nutrient cycling within its habitat. The aerobic nature of S. luteus strain HQA918 implies that it requires oxygen for growth, which may influence its distribution in environments where oxygen is readily available. The unique combination of traits, including its temperature preference and aerobic requirement, positions Sediminicola luteus strain HQA918 as potentially significant in biogeochemical processes, particularly in cold environments where organic matter decomposition is essential for ecosystem functioning. Further investigation into its metabolic capabilities and interactions within microbial communities could provide deeper insights into its ecological role and contributions to environmental health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSediminicola
SpeciesSediminicola luteus
Strainstrain HQA918

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sediminicola luteus strain HQA918


Gene Summary

Adenine Count

1293185 bp

Thymine Count

1259561 bp

Guanine Count

979343 bp

Cytosine Count

1033474 bp

Genome Length

4565563 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+4 - 115Not Available
16s ribosomal rnaNot AvailableNot Available+27 - 1548Not Available
23s ribosomal rnaNot AvailableNot Available+2222 - 5039Not Available
hypothetical proteinB7P33_00010Not Available-727 - 283580703.3
ribonuclease hiiB7P33_00015Not Available+2977 - 357322486.2
hypothetical proteinB7P33_00020Not Available+3827 - 628691749.9
5s ribosomal rnaNot AvailableNot Available+5189 - 5300Not Available
hypothetical proteinB7P33_00025Not Available+6546 - 721724733.7
hypothetical proteinB7P33_00030Not Available+7685 - 10600110927.0
hypothetical proteinB7P33_00035Not Available-10555 - 1134629822.2

Displaying genes 1 – 10 of 3819 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites