Escherichia coli strain GMR-RB-634

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain GMR-RB-634 is a Gram-negative, rod-shaped bacterium typically found in pairs or as single cells. This strain is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic conditions. It exhibits optimal growth at a temperature of 37.0°C, which aligns with the physiological temperature of the mammalian host environments it inhabits. As a member of the Enterobacteriaceae family, E. coli strain GMR-RB-634 is primarily host-associated, suggesting that it occupies niches within the gastrointestinal tracts of various organisms, including humans and other mammals. The facultative anaerobic nature of this strain enables it to adapt to fluctuating oxygen levels within the host, which is critical for its survival and proliferation in diverse biological environments. The presence of E. coli in host-associated habitats highlights its potential role in nutrient processing and gut microbiota dynamics. Furthermore, this strain's adaptability may facilitate its interactions with other microbial communities within the host, contributing to the overall homeostasis of the gut ecosystem. Understanding strains like GMR-RB-634 can provide valuable insights into microbial interactions and their implications for host health and disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain GMR-RB-634

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain GMR-RB-634
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain GMR-RB-634


Gene Summary

Adenine Count

1341792 bp

Thymine Count

1354190 bp

Guanine Count

1351190 bp

Cytosine Count

1382256 bp

Genome Length

5429428 bp

Protein-coding Genes

5151 genes

Non-Coding Genes

349 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail componentBIU72_04240Not Available-835593 - 83585510384.2
Tail componentBIU72_04245Not Available-835837 - 83625915608.4
Major tail protein vBIU72_04250Not Available-836275 - 83701525811.2
Tail componentBIU72_04255Not Available-837023 - 83741814649.9
Tail componentBIU72_04260Not Available-837415 - 83799321562.0
Head-tail joining proteinBIU72_04265Not Available-838005 - 83835812761.8
Dna packaging proteinBIU72_04270Not Available-838370 - 83876814308.9
Capsid componentBIU72_04275Not Available-838810 - 83957428311.4
Head-dna stabilization proteinBIU72_04280Not Available-839642 - 83997411572.5
Capsid componentBIU72_04285Not Available-839984 - 84130345942.4

Displaying genes 1 – 10 of 5500 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites