Helicobacter pylori strain PZ5006_3A3

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain PZ5006_3A3 is a Gram-negative microbe characterized by its spirilla shape and single cell arrangement. This strain thrives in host-associated environments, suggesting a specialized adaptation for survival within specific biological niches. Optimal growth occurs at a temperature of 37.0°C, which aligns with the typical physiological temperature of the human body, further indicating its potential association with mammalian hosts. As a microaerophilic organism, H. pylori strain PZ5006_3A3 requires reduced levels of oxygen for its metabolic processes, which is consistent with its habitat in the human gastric environment where oxygen levels are limited. This adaptation may confer advantages in colonizing the gastric mucosa, where it can evade the host's immune responses while utilizing the available nutrients in the acidic environment of the stomach. Understanding the traits of H. pylori strain PZ5006_3A3 enhances our knowledge of its ecological role in host-associated habitats, particularly its potential interactions with the host's microbiota and immune system. The microaerophilic nature of this strain may also reveal insights into its metabolic pathways and survival strategies in low-oxygen conditions, highlighting the intricate balance between microbial life and host physiology.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain PZ5006_3A3

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain PZ5006_3A3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain PZ5006_3A3


Gene Summary

Adenine Count

500919 bp

Thymine Count

492785 bp

Guanine Count

321636 bp

Cytosine Count

317637 bp

Genome Length

1633699 bp

Protein-coding Genes

1473 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding proteinBZK26_00215Not AvailableNegative42118 - 4300232130.9
flagellar biosynthesis protein flhfBZK26_00220Not AvailableNegative42999 - 4437252141.7
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseBZK26_00225Not AvailableNegative44366 - 4485719327.8
x-pro aminopeptidaseBZK26_00230Not AvailableNegative44854 - 4592740787.6
type ii 3-dehydroquinate dehydrataseBZK26_00235Not AvailableNegative45940 - 4645218809.8
polymeraseBZK26_00240Not AvailableNegative46567 - 4787150157.8
30s ribosomal protein s15BZK26_00245Not AvailableNegative47912 - 4818410478.0
flagellar biosynthesis protein flhaBZK26_00250Not AvailablePositive48319 - 5052080755.5
phosphoesteraseBZK26_00255Not AvailablePositive50551 - 5159740215.8
hypothetical proteinBZK26_00260Not AvailablePositive51953 - 522139959.23

Displaying genes 41 – 50 of 1515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 66 in total