Helicobacter pylori strain PZ5006_3A3

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain PZ5006_3A3 is a Gram-negative microbe characterized by its spirilla shape and single cell arrangement. This strain thrives in host-associated environments, suggesting a specialized adaptation for survival within specific biological niches. Optimal growth occurs at a temperature of 37.0°C, which aligns with the typical physiological temperature of the human body, further indicating its potential association with mammalian hosts. As a microaerophilic organism, H. pylori strain PZ5006_3A3 requires reduced levels of oxygen for its metabolic processes, which is consistent with its habitat in the human gastric environment where oxygen levels are limited. This adaptation may confer advantages in colonizing the gastric mucosa, where it can evade the host's immune responses while utilizing the available nutrients in the acidic environment of the stomach. Understanding the traits of H. pylori strain PZ5006_3A3 enhances our knowledge of its ecological role in host-associated habitats, particularly its potential interactions with the host's microbiota and immune system. The microaerophilic nature of this strain may also reveal insights into its metabolic pathways and survival strategies in low-oxygen conditions, highlighting the intricate balance between microbial life and host physiology.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain PZ5006_3A3

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain PZ5006_3A3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain PZ5006_3A3


Gene Summary

Adenine Count

500919 bp

Thymine Count

492785 bp

Guanine Count

321636 bp

Cytosine Count

317637 bp

Genome Length

1633699 bp

Protein-coding Genes

1473 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plasmid stabilization proteinBZK26_01470Not AvailablePositive296335 - 29796661970.0
pantothenate kinaseBZK26_01475Not AvailablePositive297971 - 29864224670.2
hypothetical proteinBZK26_01480Not AvailablePositive298633 - 29939127447.6
d,d-heptose 1,7-bisphosphate phosphataseBZK26_01485Not AvailablePositive299381 - 29990220008.3
adp-glyceromanno-heptose 6-epimeraseBZK26_01490Not AvailablePositive299912 - 30090137474.8
bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferaseBZK26_01495Not AvailablePositive300898 - 30228951068.2
phosphoheptose isomeraseBZK26_01500Not AvailablePositive302282 - 30286020989.4
gmp reductaseBZK26_01505Not AvailableNegative302884 - 30386736084.9
abc transporter atp-binding proteinBZK26_01510Not AvailablePositive304063 - 30566459979.2
phosphatase pap2 family proteinBZK26_01520Not AvailableNegative306633 - 30731925455.7

Displaying genes 281 – 290 of 1515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 66 in total