Helicobacter pylori strain PZ5006_3A3

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain PZ5006_3A3 is a Gram-negative microbe characterized by its spirilla shape and single cell arrangement. This strain thrives in host-associated environments, suggesting a specialized adaptation for survival within specific biological niches. Optimal growth occurs at a temperature of 37.0°C, which aligns with the typical physiological temperature of the human body, further indicating its potential association with mammalian hosts. As a microaerophilic organism, H. pylori strain PZ5006_3A3 requires reduced levels of oxygen for its metabolic processes, which is consistent with its habitat in the human gastric environment where oxygen levels are limited. This adaptation may confer advantages in colonizing the gastric mucosa, where it can evade the host's immune responses while utilizing the available nutrients in the acidic environment of the stomach. Understanding the traits of H. pylori strain PZ5006_3A3 enhances our knowledge of its ecological role in host-associated habitats, particularly its potential interactions with the host's microbiota and immune system. The microaerophilic nature of this strain may also reveal insights into its metabolic pathways and survival strategies in low-oxygen conditions, highlighting the intricate balance between microbial life and host physiology.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain PZ5006_3A3

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain PZ5006_3A3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain PZ5006_3A3


Gene Summary

Adenine Count

500919 bp

Thymine Count

492785 bp

Guanine Count

321636 bp

Cytosine Count

317637 bp

Genome Length

1633699 bp

Protein-coding Genes

1473 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBZK26_07485Not AvailablePositive1522358 - 152317030310.1
aspartate aminotransferaseBZK26_07490Not AvailablePositive1523330 - 152450242934.0
hypothetical proteinBZK26_07505Not AvailablePositive1526886 - 152726014749.5
integraseBZK26_07515Not AvailablePositive1527719 - 152878941268.3
cysteine methyltransferaseBZK26_07520Not AvailableNegative1528852 - 152935819288.4
hypothetical proteinBZK26_07525Not AvailableNegative1529362 - 153012927581.6
oxidoreductaseBZK26_07530Not AvailableNegative1530254 - 153120135957.1
ribonucleoside-diphosphate reductase subunit alphaBZK26_07535Not AvailableNegative1531263 - 153362990254.0
hypothetical proteinBZK26_07540Not AvailableNegative1533804 - 153430719095.4
pantothenate kinaseBZK26_07545Not AvailableNegative1534347 - 15345938907.42

Displaying genes 1411 – 1420 of 1515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 66 in total