Chromohalobacter japonicus strain SMB17

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Chromohalobacter

Description

Chromohalobacter japonicus strain SMB17 is a Gram-negative, rod-shaped bacterium that is strictly aerobic and does not form spores. This strain thrives optimally at a temperature of approximately 29.0°C, which suggests a preference for moderately warm environments, potentially similar to those found in coastal or saline habitats where this species may be naturally occurring. As a member of the genus Chromohalobacter, strain SMB17 is likely to exhibit halotolerance, which allows it to survive in saline conditions, although specific salinity preferences were not provided. The absence of sporulation indicates that this strain may rely on other survival mechanisms in adverse conditions, such as metabolic adjustments or the formation of biofilms. Understanding the physiological traits of Chromohalobacter japonicus strain SMB17 can contribute to insights into its potential applications in biotechnology, especially in processes involving saline environments. The adaptability of this strain to aerobic conditions at a moderate temperature may facilitate its role in biogeochemical cycles in coastal marine ecosystems, where oxygen levels and temperature vary. Further research on this strain could elucidate its specific ecological roles and interactions within its habitat, enhancing our knowledge of microbial diversity in saline environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusChromohalobacter
SpeciesChromohalobacter japonicus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chromohalobacter japonicus strain SMB17

Accession NumberMSDQ00000000.1

Gene Summary

Adenine Count

743993 bp

Thymine Count

742706 bp

Guanine Count

1134697 bp

Cytosine Count

1146528 bp

Genome Length

3767924 bp

Protein-coding Genes

3458 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ribosome biogenesis gtpase rsgaBTW10_01140Not Available-226293 - 22732438156.3
oligoribonucleaseBTW10_01145Not Available+227413 - 22797621338.4
trna epoxyqueuosine(34) reductase quegBTW10_01150Not Available-228001 - 22910141678.7
bifunctional adp-dependent (s)-nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseBTW10_01155Not Available+229195 - 23070351449.3
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeBTW10_01160Not Available+230722 - 23120117288.6
n-acetylmuramoyl-l-alanine amidaseBTW10_01165Not Available+231279 - 23269151197.4
dna mismatch repair protein mutlBTW10_01170Not Available+232737 - 23465971643.9
trna (adenosine(37)-n6)-dimethylallyltransferase miaaBTW10_01175Not Available+234691 - 23562935043.2
rna chaperone hfqBTW10_01180Not Available+235754 - 2360059377.41
gtpase hflxBTW10_01185Not Available+236020 - 23733949597.3

Displaying genes 231 – 240 of 3553 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites