Chromohalobacter japonicus strain SMB17

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Chromohalobacter

Description

Chromohalobacter japonicus strain SMB17 is a Gram-negative, rod-shaped bacterium that is strictly aerobic and does not form spores. This strain thrives optimally at a temperature of approximately 29.0°C, which suggests a preference for moderately warm environments, potentially similar to those found in coastal or saline habitats where this species may be naturally occurring. As a member of the genus Chromohalobacter, strain SMB17 is likely to exhibit halotolerance, which allows it to survive in saline conditions, although specific salinity preferences were not provided. The absence of sporulation indicates that this strain may rely on other survival mechanisms in adverse conditions, such as metabolic adjustments or the formation of biofilms. Understanding the physiological traits of Chromohalobacter japonicus strain SMB17 can contribute to insights into its potential applications in biotechnology, especially in processes involving saline environments. The adaptability of this strain to aerobic conditions at a moderate temperature may facilitate its role in biogeochemical cycles in coastal marine ecosystems, where oxygen levels and temperature vary. Further research on this strain could elucidate its specific ecological roles and interactions within its habitat, enhancing our knowledge of microbial diversity in saline environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusChromohalobacter
SpeciesChromohalobacter japonicus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chromohalobacter japonicus strain SMB17

Accession NumberMSDQ00000000.1

Gene Summary

Adenine Count

743993 bp

Thymine Count

742706 bp

Guanine Count

1134697 bp

Cytosine Count

1146528 bp

Genome Length

3767924 bp

Protein-coding Genes

3458 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
alcohol dehydrogenaseBTW10_17645Not Available-3694833 - 369588839348.7
udp-n-acetyl-d-glucosamine 2-epimerase, udp-hydrolysingBTW10_17650Not Available-3695904 - 369707943012.4
n-acetylneuraminate synthaseBTW10_17655Not Available-3697076 - 369807736172.4
hypothetical proteinBTW10_17660Not Available-3698074 - 369870922940.5
udp-n-acetylglucosamine 4,6-dehydrataseBTW10_17665Not Available-3699081 - 370027145172.3
polysaccharide biosynthesis proteinBTW10_17670Not Available-3700268 - 370156347848.0
aminotransferase degtBTW10_17675Not Available-3701583 - 370266839459.2
n-acetyltransferaseBTW10_17680Not Available-3702665 - 370324620623.6
oxidoreductaseBTW10_17685Not Available-3703248 - 370419535867.5
udp-n-acetyl-d-glucosamine dehydrogenaseBTW10_17690Not Available-3704209 - 370552248358.0

Displaying genes 3441 – 3450 of 3553 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites