Escherichia coli strain 559

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 559 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is categorized as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. E. coli strain 559 has an optimal growth temperature of 37.0°C, which aligns with the normal body temperature of many mammalian hosts, suggesting its adaptation to a host-associated habitat. As a member of the Enterobacteriaceae family, E. coli strain 559 likely inhabits the gastrointestinal tracts of warm-blooded animals, where it can play a role in nutrient processing and microbial balance. Its facultative anaerobic nature enables it to utilize various metabolic pathways depending on the availability of oxygen, providing it with a versatile ecological niche. The presence of this strain in host-associated habitats underscores its potential involvement in complex host-microbe interactions, which may influence digestive health and nutrient absorption. Further understanding of E. coli strain 559's specific roles within its ecological context could provide valuable insights into its contributions to host physiology and microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 559

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 559
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 559


Gene Summary

Adenine Count

1380299 bp

Thymine Count

1370426 bp

Guanine Count

1397663 bp

Cytosine Count

1406134 bp

Genome Length

5555351 bp

Protein-coding Genes

4953 genes

Non-Coding Genes

545 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Capsid proteaseBK334_00005Not Available+1 - 43516182.1
Trna-thr;Not AvailableNot Available+28 - 103Not Available
rrna,type:5sNot AvailableNot Available+143 - 25818.01
Trna-thr;Not AvailableNot Available+346 - 421Not Available
CapsidBK334_00010Not Available+450 - 166745022.2
Trna-gly;Not AvailableNot Available+428 - 502Not Available
Trna-tyr;Not AvailableNot Available+619 - 703Not Available
Trna-thr;Not AvailableNot Available+712 - 787Not Available
Trna-leu;Not AvailableNot Available+904 - 990Not Available
Trna-cys;Not AvailableNot Available+1003 - 1076Not Available

Displaying genes 1 – 10 of 5498 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites