Comamonadaceae bacterium SCN 68-20 ABT02_C0108

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Description

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonadaceae bacterium SCN 68-20 ABT02_C0108

MEFU00000000.1

Gene Summary

Adenine Count

762602 bp

Thymine Count

771451 bp

Guanine Count

1658305 bp

Cytosine Count

1655121 bp

Genome Length

4848040 bp

Protein-coding Genes

4093 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chemotaxis proteinABT02_00010Not Available-1378 - 301556914.5
hypothetical proteinABT02_00015Not Available-3058 - 364521432.6
anthranilate synthase component iABT02_00020Q9XAZ0+4003 - 550254621.8
chorismate mutaseABT02_00025Not Available+5499 - 582512426.8
anthranilate/aminodeoxychorismate synthase component iiABT02_00030P20576+5822 - 639120556.8
amp nucleosidaseABT02_00035P0AE13-6444 - 793755679.6
diguanylate cyclaseABT02_00040Not Available-7983 - 1006777311.3
hypothetical proteinABT02_00045Not Available+10236 - 1148342074.3
cation diffusion facilitator family transporterABT02_00050P74068+11569 - 1248932896.1
d-tyrosyl-trna(tyr) deacylaseABT02_00055B9MCH0+12486 - 1294115759.3

Displaying genes 1 – 10 of 4142 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

266 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da

Displaying 1–10 of 266 metabolites