Mucilaginibacter pedocola strain TBZ30

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter pedocola strain TBZ30 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and is non-spore-forming. This strain thrives optimally at a temperature of 25.0°C, suggesting a preference for moderate environmental conditions. As a member of the Mucilaginibacter genus, it is likely to be involved in the microbial dynamics of soil ecosystems, although specific ecological roles require further investigation. The Gram-negative classification indicates that M. pedocola strain TBZ30 possesses a complex cell wall structure characterized by a thin peptidoglycan layer surrounded by an outer membrane, which may confer certain advantages in nutrient uptake and resistance to environmental stresses. The rod shape of this bacterium could facilitate its motility and colonization in soil matrices, potentially enhancing its interactions with soil organic matter and other microbial communities. Given its aerobic nature, M. pedocola strain TBZ30 may play a significant role in the decomposition of organic material in oxygen-rich environments, contributing to nutrient cycling and soil health. Understanding the specific ecological functions of this strain could provide insights into its potential applications in bioremediation or sustainable agriculture, where enhancing soil microbial diversity and activity is of paramount importance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter pedocola
Strainstrain TBZ30

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter pedocola strain TBZ30


Gene Summary

Adenine Count

1896441 bp

Thymine Count

1892865 bp

Guanine Count

1628852 bp

Cytosine Count

1616954 bp

Genome Length

7035113 bp

Protein-coding Genes

5935 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
arac family transcriptional regulatorBC343_00025Not Available-3520 - 450037113.6
5s ribosomal rnaNot AvailableNot Available+5218 - 5329Not Available
hypothetical proteinBC343_00030Not Available-4662 - 534525596.2
hypothetical proteinBC343_00035Not Available-5409 - 56639194.47
hypothetical proteinBC343_00040Not Available-5927 - 621110464.6
hypothetical proteinBC343_00045Not Available-6189 - 657814720.6
hypothetical proteinBC343_00050Not Available+6696 - 706714134.6
calpastatinBC343_00055Not Available-7171 - 758715548.9
hypothetical proteinBC343_00060Not Available-7635 - 78778345.2
duf3072 domain-containing proteinBC343_00065Not Available+7970 - 82369586.73

Displaying genes 11 – 20 of 6002 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites