Clostridium beijerinckii strain DSM 53

Gram-positiveRodMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium beijerinckii strain DSM 53 is a Gram-positive, rod-shaped bacterium known for its anaerobic metabolism and chemoorganotrophic energy acquisition. This strain typically exists in pairs or as single cells, highlighting its versatile adaptive strategies in various environments. C. beijerinckii is commonly found in freshwater habitats and soil, where it plays a significant role in the degradation of organic matter. As an anaerobe, C. beijerinckii thrives in low-oxygen environments, which are prevalent in certain soil profiles and sediment layers of freshwater ecosystems. Its metabolic processes contribute to nutrient cycling, particularly in the breakdown of complex organic compounds, which can enhance soil fertility and support plant growth. Furthermore, the presence of this bacterium in these habitats suggests its potential involvement in biogeochemical processes, such as carbon and nitrogen cycling, which are crucial for maintaining ecosystem health. Overall, the ecological role of Clostridium beijerinckii strain DSM 53 underscores its importance in organic matter decomposition and nutrient recycling in anaerobic environments, making it a valuable organism for further study in microbial ecology and environmental microbiology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium beijerinckii
Strainstrain DSM 53

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridium beijerinckii strain DSM 53
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water - Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Clostridium beijerinckii strain DSM 53


Gene Summary

Adenine Count

2023829 bp

Thymine Count

2043937 bp

Guanine Count

843116 bp

Cytosine Count

862365 bp

Genome Length

5773247 bp

Protein-coding Genes

4972 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+2106270 - 2106283Not Available
AttlNot AvailableNot Available+2113903 - 2113916Not Available
Hypothetical proteinCLBCK_18880Not Available-2115629 - 211610217976.8
Conserved hypothetical phage-related proteinCLBCK_18890Not Available-2116103 - 211670822505.5
hypothetical proteinCLBCK_18900Not Available-2116963 - 211725610928.5
Hypothetical proteinCLBCK_18910Not Available-2117272 - 211768815432.8
Hypothetical proteinCLBCK_18920Not Available-2117705 - 211848128827.6
hypothetical proteinCLBCK_18930Not Available-2118545 - 21186825261.69
Hypothetical proteinCLBCK_18940Not Available-2118724 - 211925120314.7
hypothetical proteinCLBCK_18950Not Available-2119393 - 212018730500.6

Displaying genes 1 – 10 of 5130 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites