Mycobacterium scrofulaceum strain E2838

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium scrofulaceum strain E2838 is a rod-shaped bacterium belonging to the genus Mycobacterium, which is characterized by its complex cell wall structure and unique lipid composition. This strain, like others in its genus, is expected to exhibit a high degree of resilience in various environmental conditions, owing to its thick peptidoglycan layer and mycolic acid components that contribute to its hydrophobicity and resistance to desiccation. As a member of the Mycobacteriaceae family, M. scrofulaceum is often studied for its environmental adaptability and potential roles in microbial communities. While specific pathogenicity traits for strain E2838 are not available, members of this genus are known for their diverse ecological niches, often found in soil and water environments. The rod shape of M. scrofulaceum strain E2838 suggests a possible adaptation to filamentous growth patterns, which may enhance its ability to colonize various surfaces or interact with other microorganisms in its habitat. This morphological trait could facilitate nutrient acquisition and biofilm formation, potentially contributing to its ecological role in nutrient cycling within its environment. Understanding these characteristics can provide insights into the functional dynamics of microbial communities where M. scrofulaceum is present, highlighting its significance in ecosystem processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium scrofulaceum
Strainstrain E2838

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium scrofulaceum strain E2838


Gene Summary

Adenine Count

892812 bp

Thymine Count

893001 bp

Guanine Count

1931993 bp

Cytosine Count

1933105 bp

Genome Length

5650911 bp

Protein-coding Genes

4967 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+2371 - 3906Not Available
valine--trna ligaseA5679_00010Q73XN8-557 - 321498529.4
23s ribosomal rnaNot AvailableNot Available+4184 - 7292Not Available
enoyl-acp reductaseA5679_00015O53176-3280 - 453644532.9
hypothetical proteinA5679_00020O53177-4610 - 505614972.5
molybdenum cofactor guanylyltransferaseA5679_00025P65403-6040 - 664521150.5
5s ribosomal rnaNot AvailableNot Available+7380 - 7492Not Available
2-oxoacid:ferredoxin oxidoreductase subunit betaA5679_00030O53181-6647 - 773839500.5
Ncrna_class:rnase_p_rnaNot AvailableNot Available+8475 - 8875Not Available
2-oxoglutarate ferredoxin oxidoreductase subunit alphaA5679_00035O53182-7735 - 972970399.9

Displaying genes 1 – 10 of 5020 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

472 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 472 metabolites