Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7Q26_20520 | Not Available | - | 15093 - 15626 | 19033.2 |
| proteinase inhibitor i4 serpin | A7Q26_20525 | Not Available | - | 15676 - 16845 | 42243.1 |
| hypothetical protein | A7Q26_20530 | Not Available | - | 16980 - 17249 | 10043.2 |
| hypothetical protein | A7Q26_20535 | Not Available | - | 17249 - 17986 | 26687.7 |
| ti-type conjugative transfer relaxase traa | A7Q26_20540 | Not Available | - | 17996 - 20932 | 107863.0 |
| conjugal transfer protein trac | A7Q26_20545 | Not Available | + | 21109 - 21414 | 10392.2 |
| conjugal transfer protein trad | A7Q26_20550 | Not Available | + | 21452 - 21688 | 8720.24 |
| hypothetical protein | A7Q26_20555 | Not Available | + | 21681 - 21947 | 9527.35 |
| conjugal transfer protein trag | A7Q26_20565 | Not Available | + | 22866 - 24542 | 61043.2 |
| hypothetical protein | A7Q26_20570 | Not Available | + | 24621 - 25052 | 16454.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
