Paraglaciecola hydrolytica strain S66

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Paraglaciecola

Description

Paraglaciecola hydrolytica strain S66 is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and non-spore-forming nature. This strain thrives optimally at a temperature of 25.0°C, suggesting a preference for moderate environments, possibly reflecting its adaptation to specific ecological niches. As a member of the genus Paraglaciecola, this microbe may play a role in biogeochemical cycles, particularly in the degradation of organic matter, given its hydrolytic capabilities implied by its name. The aerobic requirement indicates that P. hydrolytica strain S66 utilizes oxygen for its metabolic processes, which could be relevant in environments where oxygen is available and organic substrates are present. Understanding the characteristics of Paraglaciecola hydrolytica strain S66 contributes to our knowledge of microbial diversity in various ecosystems, particularly those influenced by glacial and cold marine environments. This strain exemplifies how specific adaptations can enable survival and function in niche habitats, highlighting the importance of studying microbial life in diverse ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusParaglaciecola
SpeciesParaglaciecola hydrolytica
Strainstrain S66

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraglaciecola hydrolytica strain S66


Gene Summary

Adenine Count

1497489 bp

Thymine Count

1514460 bp

Guanine Count

1116870 bp

Cytosine Count

1078095 bp

Genome Length

5221450 bp

Protein-coding Genes

4354 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dihydrolipoamide dehydrogenaseAX660_00005Not Available-129 - 155050295.0
dihydrolipoamide acetyltransferaseAX660_00010Not Available-1667 - 332557908.8
pyruvate dehydrogenaseAX660_00015Not Available-3352 - 602799015.7
transcriptional regulator pdhrAX660_00020Not Available-6125 - 687728304.4
hypothetical proteinAX660_00025Not Available-7061 - 788531050.9
n-acetyl-anhydromuranmyl-l-alanine amidaseAX660_00030Not Available-8053 - 860420734.5
aspartyl proteaseAX660_00035Not Available+8739 - 921517412.0
galactose mutarotaseAX660_00040Not Available-9466 - 1053639084.6
gntr family transcriptional regulatorAX660_00045Not Available-10547 - 1127226658.1
hypothetical proteinAX660_00050Not Available-11338 - 1223133105.3

Displaying genes 1 – 10 of 4412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

13 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003187N-succinyl-(2S,6S)-2,6-diaminoheptanedioateC11H16N2O7Chemical structure of N-succinyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average288.257Da
Monoisotopic288.096848Da
BASm00033514-methyl-5-(2-phosphooxyethyl)-thiazoleC6H8NO4PSChemical structure of 4-methyl-5-(2-phosphooxyethyl)-thiazoleNot available
Average221.17Da
Monoisotopic220.9922631Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003462(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12PChemical structure of (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate3031-95-6
Average454.2833Da
Monoisotopic454.0737086Da
BASm00034972-C-methyl-D-erythritol 2,4-cyclic diphosphateC5H10O9P2Chemical structure of 2-C-methyl-D-erythritol 2,4-cyclic diphosphate143488-44-2
Average276.075Da
Monoisotopic275.9800049Da
BASm0003657N-acetyl-D-muramate 6-phosphateC11H17NO11PChemical structure of N-acetyl-D-muramate 6-phosphateNot available
Average370.228Da
Monoisotopic370.0555681Da
BASm0008099(2E)-4-hydroxy-3-methylbut-2-enyl diphosphateC5H9O8P2Chemical structure of (2E)-4-hydroxy-3-methylbut-2-enyl diphosphateNot available
Average259.0677Da
Monoisotopic258.9772653Da
BASm0010316N(1)-(5-phospho-beta-D-ribosyl)glycinamideC7H14N2O8PChemical structure of N(1)-(5-phospho-beta-D-ribosyl)glycinamideNot available
Average285.169Da
Monoisotopic285.049326Da

Displaying 1–10 of 13 metabolites