Caulobacter sp. Root1472

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Caulobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusCaulobacter
SpeciesCaulobacter sp. Root1472
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caulobacter sp. Root1472

LMFX00000000.1

Gene Summary

Adenine Count

899488 bp

Thymine Count

898642 bp

Guanine Count

1953759 bp

Cytosine Count

1957559 bp

Genome Length

5709804 bp

Protein-coding Genes

5047 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
fatty acid--coa ligaseASD47_00005Q0S4D9+491 - 226664712.7
6-aminohexanoate hydrolaseASD47_00010P63495-2384 - 383250561.9
hemolysinASD47_00015P9WJ62+3933 - 467025476.7
hypothetical proteinASD47_00020Not Available-4870 - 552022127.3
rna methyltransferaseASD47_00025Q9A8M7+5771 - 699743410.5
sam-dependent methyltransferaseASD47_00030Not Available+7026 - 811739045.0
Trna-cysNot AvailableNot Available+8205 - 8278Not Available
photosynthetic protein synthase iASD47_00040P38072-8298 - 887920883.1
hypothetical proteinASD47_00045Not Available-8879 - 934315460.4
sulfite reductaseASD47_00050Not Available-9346 - 1070448535.8

Displaying genes 1 – 10 of 5100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

359 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 359 metabolites