Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia sp. Root136 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1203059 bp
Thymine Count
1177277 bp
Guanine Count
2423391 bp
Cytosine Count
2478989 bp
Genome Length
7282860 bp
Protein-coding Genes
6470 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | ASD42_04685 | Not Available | Positive | 968407 - 969615 | 42020.2 |
| hypothetical protein | ASD42_04690 | Not Available | Positive | 969612 - 971069 | 50854.6 |
| 3-dehydroquinate synthase | ASD42_04695 | Not Available | Positive | 971066 - 972184 | 39272.4 |
| hypothetical protein | ASD42_04700 | Not Available | Negative | 972264 - 972716 | 15716.5 |
| shikimate dehydrogenase | ASD42_04705 | Not Available | Negative | 972788 - 973594 | 27225.8 |
| aminodeoxychorismate lyase | ASD42_04710 | Not Available | Negative | 973587 - 975092 | 54238.4 |
| holliday junction resolvase | ASD42_04715 | Not Available | Negative | 975089 - 975640 | 19233.7 |
| alanine--trna ligase | ASD42_04720 | Not Available | Negative | 975640 - 978303 | 95629.6 |
| aaa family atpase | ASD42_04725 | Not Available | Negative | 978376 - 979722 | 47525.8 |
| alkaline phosphatase | ASD42_04730 | Not Available | Positive | 979887 - 981551 | 59288.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
