Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 116 - 228 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 348 - 3239 | Not Available |
| peptide abc transporter atp-binding protein | ASD34_00010 | Not Available | + | 450 - 1265 | 29470.4 |
| abc transporter substrate-binding protein | ASD34_00015 | Not Available | + | 1320 - 2813 | 53742.6 |
| amidase | ASD34_00020 | Not Available | + | 2821 - 4221 | 49966.6 |
| 16s ribosomal rna | Not Available | Not Available | + | 3822 - 5364 | Not Available |
| aldehyde dehydrogenase | ASD34_00025 | Not Available | + | 4247 - 5695 | 51019.7 |
| 2-hydroxy-3-oxopropionate reductase | ASD34_00030 | Not Available | + | 5700 - 6590 | 30467.1 |
| lysr family transcriptional regulator | ASD34_00035 | Not Available | - | 6641 - 7528 | 32871.9 |
| indolepyruvate ferredoxin oxidoreductase | ASD34_00040 | Not Available | + | 7792 - 11337 | 128292.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.