Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Virion structural protein | APR48_04240 | Not Available | - | 941513 - 942766 | 45121.0 |
| Hypothetical protein | APR48_04245 | Not Available | - | 942865 - 943932 | 37173.9 |
| hypothetical protein | APR48_04250 | Not Available | - | 944146 - 944349 | 7644.57 |
| Hypothetical protein | APR48_04255 | Not Available | - | 944406 - 944774 | 13172.6 |
| Hypothetical protein | APR48_04260 | Not Available | - | 944771 - 945475 | 24893.6 |
| hypothetical protein | APR48_04265 | Not Available | - | 945472 - 945813 | 12564.1 |
| hypothetical protein | APR48_04270 | Not Available | - | 945810 - 946298 | 17518.0 |
| hypothetical protein | APR48_04275 | Not Available | + | 946889 - 947302 | 15483.5 |
| Portal protein | APR48_04280 | Not Available | - | 947326 - 949659 | 86592.5 |
| Bbp25 | APR48_04285 | Not Available | - | 949670 - 951217 | 56596.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.