Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_04340 | Not Available | - | 956015 - 956458 | 16072.3 |
| hypothetical protein | APR48_04345 | Not Available | - | 956455 - 956679 | 8118.85 |
| hypothetical protein | APR48_04350 | Not Available | - | 956676 - 956915 | 8496.08 |
| hypothetical protein | APR48_04355 | Not Available | - | 956917 - 957528 | 22141.2 |
| Hypothetical protein | APR48_04360 | Not Available | - | 957590 - 958426 | 29424.5 |
| Dna cytosine methyltransferase | APR48_04365 | Not Available | - | 958431 - 960197 | 65221.4 |
| Hypothetical protein | APR48_04370 | Not Available | - | 960197 - 960589 | 14789.4 |
| Putative dna cytosine methylase | APR48_04375 | Not Available | - | 960586 - 961830 | 45901.4 |
| hypothetical protein | APR48_04380 | Not Available | - | 961830 - 962141 | 11280.6 |
| hypothetical protein | APR48_04385 | Not Available | - | 962345 - 962572 | 8133.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.