Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Terminase small subunit | APR48_04290 | Not Available | - | 951221 - 951883 | 24118.9 |
| hypothetical protein | APR48_04295 | Not Available | + | 952175 - 952375 | 7398.92 |
| Trna,type:thr,anti_codon:tgt; | Not Available | Not Available | + | 952500 - 952577 | Not Available |
| Hypothetical protein | APR48_04310 | Not Available | - | 953111 - 953644 | 19286.2 |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | + | 953044 - 953120 | Not Available |
| Gp5 | APR48_04315 | Not Available | - | 953662 - 954171 | 18419.5 |
| hypothetical protein | APR48_04320 | Not Available | - | 954168 - 954689 | 19879.9 |
| Hypothetical protein | APR48_04325 | Not Available | - | 954692 - 955225 | 18599.5 |
| Hypothetical protein | APR48_04330 | Not Available | - | 955321 - 955758 | 15540.6 |
| hypothetical protein | APR48_04335 | Not Available | - | 955755 - 956018 | 9628.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.