Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_13960 | Not Available | - | 3043302 - 3043532 | 8225.78 |
| hypothetical protein | APR52_13965 | Not Available | - | 3043525 - 3043734 | 7470.84 |
| Structural protein | APR52_13970 | Not Available | - | 3043731 - 3044486 | 27014.5 |
| Attr | Not Available | Not Available | + | 3049494 - 3049507 | Not Available |
| Hypothetical protein | APR52_14060 | Not Available | + | 3054013 - 3054546 | 18599.5 |
| hypothetical protein | APR52_14065 | Not Available | + | 3054549 - 3055070 | 19879.9 |
| Gp5 | APR52_14070 | Not Available | + | 3055067 - 3055576 | 18419.5 |
| Hypothetical protein | APR52_14075 | Not Available | + | 3055594 - 3056127 | 19286.2 |
| trna,type:met,anti_codon:cat | Not Available | Not Available | + | 3056118 - 3056194 | 18.01 |
| trna,type:thr,anti_codon:tgt | Not Available | Not Available | + | 3056661 - 3056738 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.