Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00477 | Not Available | - | 148071 - 148508 | 15931.1 |
| Repressor protein | ALO56_00478 | Not Available | + | 148639 - 149295 | 24438.6 |
| Attl | Not Available | Not Available | + | 5467509 - 5467520 | Not Available |
| Putative integrase | ALO56_04384 | Not Available | + | 5467899 - 5469263 | 52449.9 |
| Error-prone lesion bypass dna polymerase v | ALO56_04389 | P04152 | - | 5469376 - 5470728 | 50227.0 |
| Protein umud | ALO56_00217 | P22493 | - | 5470643 - 5471077 | 15721.1 |
| Sos response associated peptidase | ALO56_00218 | P76318 | + | 5471190 - 5471879 | 26078.2 |
| Dna adenine methylase gp25 | ALO56_100133 | Not Available | - | 5472940 - 5473767 | 31956.6 |
| Glycoside hydrolase family 19 protein | ALO56_00219 | O64203 | - | 5473913 - 5474458 | 19926.8 |
| Putative tail protein | ALO56_00220 | P10312 | - | 5474497 - 5475540 | 38213.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
