Pseudomonas syringae pv. atrofaciens strain ICMP4394

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. atrofaciens strain ICMP4394 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is classified as a heterotroph, indicating that it derives its energy from organic compounds. As an aerobic organism, P. syringae pv. atrofaciens requires oxygen for its metabolic processes, which is consistent with its adaptability to various environments. The habitat of this strain spans multiple ecological niches, suggesting a versatile lifestyle and potential interactions with a variety of substrates and organisms in its environment. The ability of Pseudomonas syringae species to thrive in diverse habitats underlines their ecological significance, particularly in soil and plant-associated ecosystems, where they may play roles in nutrient cycling and interactions with other microbial communities. Overall, the traits of Pseudomonas syringae pv. atrofaciens strain ICMP4394 reflect a well-adapted microorganism capable of exploiting various organic resources in oxygen-rich environments, thereby contributing to the complexity of microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. atrofaciens strain ICMP4394

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. atrofaciens strain ICMP4394
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityPlant

Genome Summary

Pseudomonas syringae pv. atrofaciens strain ICMP4394


Gene Summary

Adenine Count

1237723 bp

Thymine Count

1227659 bp

Guanine Count

1764699 bp

Cytosine Count

1781727 bp

Genome Length

6012246 bp

Protein-coding Genes

5103 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
LysozymeALO42_05138Not Available-1949148 - 194960516522.9
unknown protein sequenceALO42_03289Not Available-1949602 - 19497515628.62
Putative tail-collar fibre proteinALO42_03290Not Available-1949760 - 195107044577.1
Tail proteinALO42_03291Not Available-1951081 - 195168022293.7
Tail proteinALO42_03292Not Available-1951668 - 195270837011.8
Putative tail proteinALO42_03293Not Available-1952698 - 195309615337.0
Putative base plate assembly proteinALO42_03294Not Available-1953093 - 195360517981.6
Tail proteinALO42_03295Not Available-1953602 - 195472941189.8
Tail/dna circulation proteinALO42_03296Not Available-1954733 - 195615750212.7
Putative tail proteinALO42_03297Not Available-1956154 - 195831375057.7

Displaying genes 1 – 10 of 5209 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites