Helicobacter pylori strain 22

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain 22 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. This organism thrives optimally at a temperature of 37.0°C, which aligns with its habitat as a host-associated microbe, primarily found in the gastric environment of various hosts. The microaerophilic nature of H. pylori strain 22 indicates that it requires lower levels of oxygen for growth than are typically found in the atmosphere, which is consistent with its adaptation to the oxygen-limited conditions of the stomach lining. This adaptation is significant for its survival and colonization within the host's gastric niche, where it can influence local microenvironments and potentially interact with the host's immune response. The unique morphology of H. pylori strain 22, as a spirilla, may assist in its motility within the viscous gastric mucus, enhancing its ability to reach and adhere to gastric epithelial cells. This characteristic, combined with its specific oxygen requirements and optimal growth temperature, underscores the bacterium's evolutionary adaptations to the gastrointestinal tract. Understanding these traits can provide insight into its ecological role in host-associated environments and its potential interactions with other microbiota present in the stomach.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain 22

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain 22
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain 22


Gene Summary

Adenine Count

504561 bp

Thymine Count

504420 bp

Guanine Count

316814 bp

Cytosine Count

324219 bp

Genome Length

1650014 bp

Protein-coding Genes

1491 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1230863 - 1230879Not Available
Putative transcriptional regulator proteinAM498_05975Not Available-1237064 - 123791832261.5
Hypothetical proteinAM498_05980I7H0I4-1237918 - 123877231726.7
Hypothetical proteinAM498_05985Not Available-1238787 - 123966833628.9
Hypothetical proteinAM498_05990Not Available-1239724 - 124005012660.5
Hypothetical proteinAM498_05995Not Available-1240050 - 124061621579.6
Hypothetical proteinAM498_06000Not Available-1240621 - 124141829576.2
Hypothetical proteinAM498_06005Not Available-1241420 - 124196520800.9
Hypothetical proteinAM498_06010Not Available-1242012 - 12422308357.38
Hypothetical proteinAM498_06015Not Available-1242227 - 124321937786.7

Displaying genes 1 – 10 of 1555 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

93 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da

Displaying 1–10 of 93 metabolites