Clostridium ljungdahlii strain ERI-2

Gram-positiveRodMotileAerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium ljungdahlii strain ERI-2 is a Gram-positive, rod-shaped bacterium that exhibits a unique cell arrangement, occurring in pairs and singles. This strain is characterized by its ability to sporulate, which enhances its survival in diverse environmental conditions. As a chemoorganotroph, C. ljungdahlii strain ERI-2 utilizes organic compounds as its energy source, allowing it to thrive in terrestrial habitats where organic matter is available. Notably, this strain is aerobic, indicating that it requires oxygen for its metabolic processes. The combination of its morphological traits and metabolic capabilities suggests that C. ljungdahlii strain ERI-2 occupies a niche in terrestrial environments that may involve the decomposition of organic materials, contributing to nutrient cycling. This ecological role may be significant in maintaining soil health and fertility, as well as in biotechnological applications aimed at organic waste management.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium ljungdahlii
Strainstrain ERI-2

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridium ljungdahlii strain ERI-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs-Singles
SporulationSporulating
Energy source Chemoorganotroph
PathogenicityNot Available

Genome Summary

Clostridium ljungdahlii strain ERI-2


Gene Summary

Adenine Count

1533440 bp

Thymine Count

1472292 bp

Guanine Count

709879 bp

Cytosine Count

648289 bp

Genome Length

4363917 bp

Protein-coding Genes

4029 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Gp245WY13_00781O83078-820162 - 82082424494.9
Trna,type:glu,anti_codon:ctc;Not AvailableNot Available+821178 - 821252Not Available
AttlNot AvailableNot Available+821220 - 821254Not Available
IntegraseWY13_00783Not Available-821339 - 82252045077.8
Hypothetical proteinWY13_00784Not Available-822646 - 82289710101.4
hypothetical proteinWY13_00785Not Available-822952 - 82328412634.3
hypothetical proteinWY13_00786Not Available-823312 - 82443643343.1
RepressorWY13_00787Not Available-824487 - 82490316000.2
helix-turn-helix domain proteinWY13_00788Not Available+825057 - 8253119812.99
Helix-turn-helix domain-containing proteinWY13_00789Not Available+825365 - 82588319651.6

Displaying genes 1 – 10 of 4136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

173 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da

Displaying 1–10 of 173 metabolites